PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_07810.1_g00005.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family GeBP
Protein Properties Length: 167aa    MW: 19538.1 Da    PI: 4.7579
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_07810.1_g00005.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57341.63.4e-1368151696
                   DUF573   6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkv.sksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkife 90 
                               wsee +i+lL+Gli+f+++ +k ++ +   f+++++k++++    k+q++e i rLK +f  +++k         + + d+ +f+
  Sme2.5_07810.1_g00005.1  68 KWSEEEQITLLKGLIEFESQYEKYVHIEPCIFHDYIHKKLNIPLlDKRQITEEIDRLKVQFIADWDK--------EKPPFDDLVFQ 145
                              6****************************************9863799******************9........35577899999 PP

                   DUF573  91 lskkiW 96 
                              ls+ +W
  Sme2.5_07810.1_g00005.1 146 LSREVW 151
                              999999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.8E-968151IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MNGETESRPF SDLVFYTNCK PGQGFTNVAW KDGLGISPRF EKGSIRQLKK ITCEKSDSIT  60
STKAPPHKWS EEEQITLLKG LIEFESQYEK YVHIEPCIFH DYIHKKLNIP LLDKRQITEE  120
IDRLKVQFIA DWDKEKPPFD DLVFQLSREV WLTKLEESIT EDEDDNG
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23692041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.11e-09DNA-binding storekeeper protein-related transcriptional regulator